Featured 

Sequence Alignment

 Software
BioEdit

BioEdit

free
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8,728
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Tom Hall
An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences...
BioEdit is a biological sequence alignment editor. An intuitive multiple...
clustalx

clustalx

free
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Clustal X is a windows interface for the ClustalW multiple sequence alignment program. It provides an integrated...
...ClustalW multiple sequence alignment program. It ...the results. The sequence alignment is displayed in...
MEGA

MEGA

free
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MEGA is an integrated tool for conducting automatic and manual sequence alignment, inferring phylogenetic...
...and manual sequence alignment, inferring phylogenetic ...inferring ancestral sequences, and testing...
Cn3D

Cn3D

free
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1,703
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NCBI
Cn3D (to be read "see in 3D") is an application offered as support...
...of structure, sequence and alignment of bio ...displayed and the "sequence/alignment viewer", where...
Vector NTI Advance

Vector NTI Advance

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Vector NTI Advance is a program that offers unparalleled, multi-modular, integrated sequence analysis and data management...
...tools. It provides multiple sequence alignment of proteins and DNAs...
ClustalW2

ClustalW2

free
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ClustalW2 is a general purpose multiple sequence alignment program...
...biologically meaningful multiple sequence alignments of divergent sequences. It calculates the...
Unipro UGENE

Unipro UGENE

free
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382
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Unipro, Russia
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only...
...tools -Multiple sequence alignment using MUSCLE 3 ...view; -Multiple alignment editor; -Chromatograms...
Jalview

Jalview

free
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Jalview is a free program for multiple sequence alignment editing, visualization and analysis. You can use...
...a free program for multiple sequence alignment editing, visualization and analysis...
DNAMAN

DNAMAN

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DNAMAN is a one-for-all software package for molecular biology applications. This package...
...perform multiple sequence alignment, designing PCR primers, protein sequence analysis or...
DAMBE

DAMBE

free
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218
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XiaLab
DAMBE is an integrated software package for converting, manipulating, statistically and graphically...
...amino acid sequences - Aligning protein-coding nucleotide sequences against aligned amino acid...
EZEditor

EZEditor

free
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19
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Chunlab Inc.
EzEditor is a Java-based sequence alignment editor allowing manipulation...
...Java-based sequence alignment editor allowing ...and protein sequence alignments for phylogenetic...
Schrodinger Prime

Schrodinger Prime

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Schrodinger Prime is a powerful and innovative package for accurate protein structure...
...user intuitively from sequence to alignment to refined structure. Prime...
BSqAn

BSqAn

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BioSeqAnalyzer is a tool for BioInformatics sequence analysis. Supports the following Sequence Analysis...
...global alignment of two sequences - Local alignment of two sequences - Multiple alignment of...
BSEdit

BSEdit

free
Download
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5
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BSEdit
BSEdit is a WYSIWYG and efficient multiple sequence alignment editor. It can handle...
...and efficient multiple sequence alignment editor. It can ...large multiple sequence alignment and can...
SamTools

SamTools

free
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SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide...
SAM (Sequence Alignment/Map) format ...storing large nucleotide sequence alignments. SAM Tools provide...